Following is the Final Program of the Data Mining in Bioinformatics Workshop. Next to the each paper there is also the page numbers of the proceedings where this paper is published.

8:00 - 8:05 Opening Remarks by Chair - Prof. Tony Hu

8:05 - 8:30 Plenary Invited Speech 1

"Clustering Support Vector Machines with Application to Prediction of Protein Local Tertiary Structures" by Prof. Yi Pan

8:30 - 10:00 Data Mining in Bioinformatics I (Chair: Prof. Tony Hu)

8:30 - 8:45 Francisco Azuaje, Haiying Wang, Huiru Zheng, Olivier Bodenreider, and Alban Chesneau, "Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions", pp 114 - 119.

8;45 - 9:00 Shihua Zhang, Hong-Wei Liu, Xue-Mei Ning, and Xiang-Sun Zhang, "A Graph-Theoretic Method for Mining Functional Modules in Large Sparse Protein Interaction Networks", pp 130 - 135.

9:00-9:15 Margherita Berardi, Donato Malerba, and Marcella Attimonelli, "Mining Information Extraction Models for HmtDB annotation", pp 207-212.

9:15-9:30 Giuseppe Di Fatta, Antonino Fiannaca, Riccardo Rizzo, Alfonso Maurizio Urso, Michael R. Berthold, and Salvatore Gaglio, "Context-Aware Visual Exploration of Molecular Databases", pp 136-141.

9:30-9:45 Pai-Hsi Huang and Vladimir Pavlovic, "Sparse Logistic Classifiers for Interpretable Protein Homology Detection",
pp 99-103.

9:45-10:00 Chang hun You, Lawrence Holder, and Diane Cook, "Application of Graph-based Data Mining to Metabolic Pathways", pp 169-173.

10:00 - 10:30 Coffee Break

10:30 - 12:30 Data Mining in Bioinformatics II (Chair: Prof. Tharam Dillon)

10:30-11:00 Sun Kim, Kwangmin Choi, and Amit Saple, "Genome Data Type: a Vehicle to Deliver a Genome Comparison System on the Web", pp 142-146.

11:00-11:15 Brigitte Mathiak, Andreas Kupfer, Tatjana Scope, Britta Stoermann, and Silke Eckstein, "Using image classification for biomedical literature retrieval", pp 185-189.

11:15-11:30 Gunjan Gupta, Alexander Liu, and Joydeep Ghosh, "Automated Hierarchical Density Shaving: A robust, automated clustering and visualization framework for large biological datasets", pp 89-93.

11:30-11:45 Young-Rae Cho, Woochang Hwang, and Aidong Zhang, "Identification of Overlapping Functional Modules in Protein Interaction Networks: Information Flow-based Approach", pp 147-152.

11:45-12:00 Thomas Wolf, Benedikt Brors, Thomas Hofmann, and Elisabeth Georgii, "Global Biclustering of Microarray Data", pp 125-130.

12:00-12:30 Cui Lin, Shiyong Lu, Xuwei Liang, and Jing Hua, "GCA: a Coclustering Algorithm for Thalamo-Cortico-Thalamic Connectivity Analysis", pp 163-168.

12:30 - 14:00 Lunch Break

14:00 - 14:05 Opening Remarks by Chair - Prof. Tharam S. Dillon

14:05 - 14:30 Plenary Invited Speech 2

"Mining Substructures in Protein Data" by Prof. Tharam S. Dillon

14:30 - 16:00 Data Mining in Bioinformatics III (Chair: Prof. Tharam Dillon)

14:30-14:45 Tuan D. Pham, Vikram Chandramohan, Xiaobo Zhou, and Stephen T. C. Wong, "Robust Feature Extraction and Reduction of Mass Spectrometry Data for Cancer Classification", pp 202-206.

14:45-15:oo Michael K. Ng, Mark J. Li, Sio I. Ao, Pak C. Sham, Yiu-ming Cheung, and Joshua Z. Huang, "Subspace Clustering of High-dimensional SNP Data with Application to Genomics", pp 158-162.

15:00-15:15 Sam Chao and Yiping Li, "Uncovering Potential Attribute Relevance via MIA-Processing in Data Mining",
pp 212-222.

15:15-15:30 Li-Juan Zhang, Zhou-Jun Li, and Huo-Wang Chen, "Minimum Redundancy Gene Selection Based on Grey Relational Analysis", pp 120-124.

15:30-15:45 Patrick Ma and Chun Chung Chan, "Inference of Gene Regulatory Networks from Time Series Expression Data: A Data Mining Approach", pp 109-113.

15:45-16:00 Yuanchen He, Yuchun Tang, Yan-Qing Zhang, and Rajshekhar Sunderraman, "Fuzzy-Granular Gene Selection from Microarray Expression Data", pp 153-157.

16:00 - 16:30 Coffee Break

16:30 - 18:15 Data Mining in Bioinformatics IV (Chair: Prof. Tony Hu)

16:30-16:45 Panagiotis Papapetrou, Gary Benson, and George Kollios, "Discovering Frequent Poly-Regions in DNA Sequences", pp 94-98.

16:45-17:00 Frank Klawonn, Claudia Hundertmark, and Lothar Jänsch, "A Maximum Likelihood Approach to Noise Estimation for Intensity Measurements in Biology", pp 180-184.

17:00-17:15  Claudia Plant, Melanie Osl, Bernhard Tilg, and Christian Baumgartner, "Feature Selection on High Throughput SELDI-TOF Mass-Spectrometry Data for Identifying Biomarker Candidates in Ovarian and Prostate Cancer", pp 174-179.

17:15-17:30 Mutlu Mete, Xiaowei Xu, Chun-Yang Fan, and Gal Shafirstein, "A Machine Learning Approach for Automatic Delineation of Head and Neck Cancer in Histological Slides", pp 223-228.

17:30-17:45 Meghana Deodhar and Joydeep Ghosh, "Consensus Clustering for Detection of Overlapping Clusters in Microarray Data", pp 104-108.

17:45-18:00 Haixia Li and R. Krishna Murthy Karuturi, "Significance Analysis and Improved Discovery of Differentially Co-expressed Gene Sets in Microarray Data", pp 196-201.

18:00-18:15 Zhengzheng Xing and Dan Wu, "Modeling Multiple Time Units Delayed Gene Regulatory Network Using Dynamic Bayesian Network", pp 190-195.

[ICDM 2006] [BIOMAP Project] [PO Project] [EXEL] [DKE Lab] [CEEBI]